Research
See our published work:
2023
Impacts of Climate Change and Air Pollution on Neurologic Health, Disease, and Practice
Neurology
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07 Mar 2023
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doi:10.1212/WNL.0000000000201630
EGFR Pathway Expression Persists in Recurrent Glioblastoma Independent of Amplification Status
Cancers
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21 Jan 2023
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doi:10.3390/cancers15030670
2022
First clinical experience with belzutifan in von Hippel–Lindau disease associated CNS hemangioblastoma
CNS Oncology
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01 Sep 2022
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doi:10.2217/cns-2022-0008
2021
Neurology in a Changing Climate: A Scoping Review
Cold Spring Harbor Laboratory
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26 Nov 2021
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doi:10.1101/2021.11.24.21266840
Exploiting convergent evolution to derive a pan-cancer cisplatin response gene expression signature
Cold Spring Harbor Laboratory
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11 Nov 2021
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doi:10.1101/2021.11.10.21265799
Network potential identifies therapeutic miRNA cocktails in Ewing sarcoma
PLOS Computational Biology
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18 Oct 2021
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doi:10.1371/journal.pcbi.1008755
Extracellular miRNA biomarkers in neurologic disease: is cerebrospinal fluid helpful?
Biomarkers in Medicine
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01 Oct 2021
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doi:10.2217/bmm-2021-0092
UV decontamination of personal protective equipment with idle laboratory biosafety cabinets during the COVID-19 pandemic
PLOS ONE
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26 Jul 2021
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doi:10.1371/journal.pone.0241734
2020
Identifying States of Collateral Sensitivity during the Evolution of Therapeutic Resistance in Ewing's Sarcoma
iScience
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01 Jul 2020
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doi:10.1016/j.isci.2020.101293
Role of gene signatures combined with pathology in classification of oropharynx head and neck cancer
Scientific Reports
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23 Jun 2020
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doi:10.1038/s41598-020-66983-x
Continuous Electroencephalography (cEEG) Characteristics and Acute Symptomatic Seizures in COVID-19 Patients
Cold Spring Harbor Laboratory
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28 May 2020
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doi:10.1101/2020.05.26.20114033
A super-series of extracellular miRNA in cerebrospinal fluid reveals broad patterns associated with neurologic disease
Cold Spring Harbor Laboratory
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23 May 2020
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doi:10.1101/2020.05.20.20108472
Resistance to targeted therapies as a multifactorial, gradual adaptation to inhibitor specific selective pressures
Nature Communications
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14 May 2020
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doi:10.1038/s41467-020-16212-w
UV Sterilization of Personal Protective Equipment with Idle Laboratory Biosafety Cabinets During the COVID-19 Pandemic
Cold Spring Harbor Laboratory
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27 Mar 2020
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doi:10.1101/2020.03.25.20043489
2019
Endogenous miRNA sponges mediate the generation of oscillatory dynamics for a non-coding RNA network
Journal of Theoretical Biology
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01 Nov 2019
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doi:10.1016/j.jtbi.2018.10.055
Cooperative adaptation to therapy (CAT) confers resistance in heterogeneous non-small cell lung cancer
PLOS Computational Biology
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26 Aug 2019
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doi:10.1371/journal.pcbi.1007278
Targeting tumor phenotypic plasticity and metabolic remodeling in adaptive cross-drug tolerance
Science Signaling
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20 Aug 2019
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doi:10.1126/scisignal.aas8779
Guidelines for using sigQC for systematic evaluation of gene signatures
Nature Protocols
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10 Apr 2019
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doi:10.1038/s41596-019-0136-8
2018
Pan-cancer characterisation of microRNA across cancer hallmarks reveals microRNA-mediated downregulation of tumour suppressors
Nature Communications
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07 Dec 2018
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doi:10.1038/s41467-018-07657-1
TDAstats: R pipeline for computing persistent homology in topological data analysis
Journal of Open Source Software
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08 Aug 2018
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doi:10.21105/joss.00860
Endogenous miRNA sponges mediate the generation of oscillatory dynamics for a non-coding RNA network
Cold Spring Harbor Laboratory
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31 Mar 2018
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doi:10.1101/292029
2017
Recasting the cancer stem cell hypothesis: unification using a continuum model of microenvironmental forces
Cold Spring Harbor Laboratory
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28 Jul 2017
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doi:10.1101/169615
Collateral sensitivity networks reveal evolutionary instability and novel treatment strategies in ALK mutated non-small cell lung cancer
Scientific Reports
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27 Apr 2017
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doi:10.1038/s41598-017-00791-8
2016
Collateral sensitivity networks reveal evolutionary instability and novel treatment strategies in ALK mutated non-small cell lung cancer
Cold Spring Harbor Laboratory
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19 Sep 2016
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doi:10.1101/075846